Personal details
Stuart C.
Timezone: London (UTC+1)
Summary
For the past 8 years I have predominantly used Python for the generation of custom data pipelines and analysis algorithms for biological science discovery.
Currently, my remit is within population genetics which incorporates many different dataset types which are often terabytes in size. I am also well versed in R, Git, Linux and Bash.
I enjoy creating novel algorithms but also optimising existing or legacy code.
Technical skills
Top 3 skills
Work Experience
Data Scientist (Population genetics)
University of Exeter | Sep 2020 - Present
Python
Linux
R
Bash
OpenStack
AWS (Amazon Web Services)
Working with genetic data for ~500,000 individuals I create custom analysis pipelines and algorithms to identify genetic causes of disease.
Lead Data Engineer
University of Exeter | Sep 2017 - Sep 2020
Python
Linux
R
Version control
Automation
Embedded within a biological sciences research group to lead on generation of custom analysis pipelines for drug target discovery.
Personal Projects
2016
Python
Web Scraping
Gnuplot
For this project I aggregated open source data to create informative visual outputs for the end user. My contribution to the field of Genetic Healthcare Science with this work was formally recognised in the UK Best Practice Guidelines for Variant Interpretation.